1998 RESEARCH
PROJECTS
Program Element 6
Bacterial Transport
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PROJECT:
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The
Influence of Heterogeneity and Growth on Microbial Transport in Saturated
Porous Media |
PRINCIPAL
INVESTIGATOR: |
Ellyn
M. Murphy |
PROGRAM
ELEMENT 6 |
Acceleration
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OBJECTIVE:
The co-disposal of organic chelating agents with radionuclides at
Department of Energy (DOE) sites has resulted in enhanced mobility of
these hazardous wastes. The success of biogeochemical alterations of
these complexes is ultimately controlled by the transport and distribution
of bacteria in physically and chemically heterogeneous porous media.
Bacterial transport work to date has emphasized inert biocolloids or
bacteria in a non-growth state. Growth, however, has been shown to enhance
the aqueous-phase concentration of bacteria in groundwater which enhances
the likelihood of bacterial transport. Therefore, to accurately represent
bacterial transport during intrinsic bioremediation, growth processes
must be incorporated and coupled to a transient microbial population.
APPROACH:
Specific processes that control transport in heterogeneous porous
media will be isolated by performing controlled intermediate-scale experiments
using physical and chemical heterogeneity patterns found at DOE's Oyster
Site in Virginia. These intermediate-scale experiments enable us to
test the manifestation of pore-scale processes at larger scales, more
representative of the complexities found in the field. The experimental
data will be used to test theoretical scaling approaches that accurately
represent nonlinear growth reactions. This interdisciplinary research
project will provide fundamental information on i) the role of growth
in initiating bacterial transport, ii) dominant processes controlling
bacterial transport in heterogeneous porous media, and iii) valid scaling
approaches for predicting these coupled, nonlinear processes at the
field scale.
PROJECT:
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Enhancement
of Bacterial Transport in Aerobic and Anaerobic Environments: Assessing
the Effects of Metal-Oxide Chemical Hetereogeneity |
PRINCIPAL
INVESTIGATOR: |
Tullis
C. Onstott |
PROGRAM
ELEMENT 6 |
Acceleration
|
OBJECTIVE:
The research seeks to resolve technical problems and obstacles to
successful accelerated bioremediation, and specifically the delivery
of microorganisms to contaminated subsurface zones, or bioaugmentation,
at the field scale. The application builds on multi-institutional research
at a field site at Oyster, Virginia, and extrapolates field experience
from aerobic portions of the site (the aerobic subsite) to a low dissolved
oxygen/anaerobic subsite. The investigators responded to DOE's request
to include supporting core and field characterization, site analysis
capabilities and services (excluding drilling which will be funded independently
by DOE/OBER through Golder Associates) in this application; these important
scientific elements would otherwise be scattered across many institutions
nationally. DOE's request is based partly on the concerns of some reviewers
who stated that a lead investigator must have scientific (budgetary)
control over supporting scientists to complete complex, cross-disciplinary
research successfully.
The investigators
propose a challenging field research project to determine the influence
of ferric iron hydroxide mineral coatings, manganese oxides, and bacterial
adhesive properties on the field-scale migration of bacteria injected
into anaerobic groundwater systems. At many mixed metal-organic contaminated
sites, anaerobic conditions predominate. The research will address:
(1) the potential for preferential adhesion of bacteria to Fe oxide
phases, (2) the role of bacterial adhesion in determining the bacterial
migration distance in zones that vary in permeability, and (3) the potential
influence of microbial Fe reduction in enhancing bacterial transport
by reducing the adhesion of dissimilatory iron reducing (DIRB) and other
bacteria.
This will
be accomplished at the field scale by integrating disparate capabilities
from eight universities and national laboratories, and specifically:
Princeton University will assume overall responsibility for distribution
of research funds, ensure collaboration among investigators, oversee
the research efforts of the individual institutions, and organize several
yearly research meetings. Princeton will share this responsibility with
Envirogen Inc. Princeton University will also be responsible for the
mineralogical/geochemical characterization of sediment and groundwater
samples from Oyster (in cooperation with Old Dominion University) and
for development of alternative isotope labeling approaches. Envirogen
Inc. will conduct laboratory experiments on intact core, characterize
membrane properties of microorganisms to be utilized for the field experiments,
and organize field experiments. Montana State University will conduct
bacterial tracer studies and isotopic analyses of suspended organic
matter. Lawrence Berkeley National Laboratory will apply high resolution
geophysical techniques to characterize the lower flow field site at
Oyster, and assist in linking that flow field to a nearby pit by geophysical
analysis. Old Dominion University will analyze the cores collected from
the lower flow field at Oyster and will also characterize the porosity,
grain size, and permeability of these samples. University of California-Davis
will perform one-dimensional modeling of the intact core experimental
data to determine adsorption/desorption parameters. Pacific Northwest
National Laboratory will be responsible for applying three-dimensional,
high resolution computer models of bacterial transport in porous media
to the field data collected at Oyster. They will also provide assistance
in the characterization of any facultative DIRB discovered at Oyster.
(Companion support will be provided directly by DOE to Dr. J. Fredrickson
to assist in investigations iron biogeochemistry as it controls bacterial
attachment and mobility.) Florida State University will provide analytical
services related to the characterization of microbial communities in
subsurface sediment and water samples from laboratory column experiments
carried out at Envirogen, Inc.
The investigators'
research plan includes laboratory experiments to define the role of
Fe and Mn oxides on bacterial adhesion using radiolabeled bacteria in
the field and intact cores from the Oyster field research site. Macroscopic
distribution of bacteria throughout the core will be measured by liquid
scintillation counting and autoradiography. The distribution of bacteria
will be compared to the distribution of Fe and Mn oxides determined
by XRD analysis of subsamples and by mapping microscopic distribution
using scanning electron microscopy. Experiments will be repeated on
intact cores in which Fe and Mn oxides have been selectively removed
by chemical reduction and complexation. Field experiments at the Oyster
field research site to quantify active transport of isotopically-labeled
(stable C, N isotopes) indigenous strains in aerobic and anaerobic flow
fields. To determine the importance of adhesion and chemical heterogeneity
in bacterial transport, the relative migration distances of a wild-type
and adhesion deficient variant of the same indigenous bacterial strain
will be compared in a single injection experiment at the anaerobic subsite
using two isotopic labels (C and N). Knowing the factors that affect
transport will enable manipulation of the environment or the injected
strains to effectively disperse bacteria throughout the zone of contamination
with time.
APPROACH:
The investigators' approach includes integration of field scale
observations with supporting core-scale (laboratory) studies with a
focus on a series of exploratory, multi-institutional experiments on
bacterial migration in the presence of in situ natural heterogeneities
(dominated by iron oxides) at the aerobic subsite; this research at
the Oyster site was interrupted with the termination of the Subsurface
Science Program, with delays, loss of momentum, and dispersal of working
teams. As a result, some investigators participating in this proposed
research are as yet refining tools to study bacterial transport under
aerobic conditions, and other methods including, validation of a 3D
flow model, intact core studies of bacterial kinetics, and stable isotope
labeling are in the final stages of testing.
PROJECT:
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Vibration-accelerated
Transport of Microbes in Subsurface Media |
PRINCIPAL
INVESTIGATOR: |
Tom
J. Phelps |
PROGRAM
ELEMENT 6 |
Acceleration
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OBJECTIVE:
The low rates of transport of microorganisms, particulates or colloids
through porous subsurface media poses severe limitations on the impact
and applicability of biological processes for the in situ remediation
of subsurface contaminants. Nowhere are those limitations more acute
than in remediation of radionuclides and metal contaminants in deep
subsurface formations. Because classical approaches of bacterial strain
selection have not overcome the limitations of filtration and retardation
on particulate transport, the proposed research investigates the potential
of vibration-based energies directed at subsurface environments to increase
particulate transport up to 30-fold.
The goal
is to develop a conceptual framework for vibration-facilitated particulate
transport through porous subsurface media based on laboratory experiments.
It is hypothesized that vibrational energies will result in dramatically
increased (up to thirty-fold greater) particulate and microbial transport.
The objective is to examine the effects of vibrational energies on microbial
and particulate transport in porous media using intact-core columns
to develop a conceptual understanding of accelerated particulate transport
based on empirical laboratory and field-scale experimental results.
APPROACH:
Our approach is to evaluate and assess the applicability of vibration-induced
particulate transport though detailed hypothesis testing in laboratory
experiments complimented by comparisons between vibration-induced transport
and that obtained by traditional injection approaches. The rationale
lies with the well-documented retardation and filtration of most mm-sized
particulates within meters of injection and the need to overcome this
retardation to effectively and efficiently deliver microbes, particulates
or nutrients throughout a contaminant plume. Preliminary results indicate
that vibration may increase dispersion (observed by the broadening of
effluent conservative tracer peaks) and transport. Detailed experiments
will further examine increased dispersion, transport and flow through
laboratory columns.
PROJECT:
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Heterogeneity
of Sedimentary Aquifers: Expansion of "System" Stratigraphic
Concepts, Calibrated Against 'Geophysical Imaging' by Ground Penetrating
Radar. |
PRINCIPAL
INVESTIGATOR: |
Donald
J. P. Swift |
PROGRAM
ELEMENT 6 |
Acceleration
|
OBJECTIVE:
The investigators' plan to determine the dominant physical (lithological,
structural, and hydrological) characteristics that can be imaged by
geophysical methods in situ and correlated with important physical
and chemical properties that in turn can be related to microbial properties.
The proposed research incorporates recent advances in sedimentation
physics and geophysical imaging to determine: (1) the scale and methods
that should be used to measure physical, chemical, and microbial properties
in order to understand subsurface fluid and chemical transport properties,
(2) the degree and scales of physical properties that control chemical
and biological properties, and (3) how different types of heterogeneity
can effectively be integrated into three dimensional models. The investigators
will compare aerobic microbiological properties and processes in cross-stratified
sediment units with uniform, horizontally stratified units, and to infer
how physical and mineral properties influence microbial dynamics. These
results will be extrapolated in time to appropriate DOE sites similar
geology, such as Savannah River, and to a NABIR field site.
APPROACH:
The approach involves (1) geophysical imaging at the Oyster field
site, with characterization using multiple geophysical tools, e.g.,
multi-borehole high frequency tomography in the saturated zone and high
resolution pulse radar in the unsaturated zone; (2) core scale analysis
using seismic and other measurements for geological analysis (grain
size, texture, porosity, mineralogy), and microbial properties; and
(3) integration of geological and hydrologic data into a field scale
geophysical model (a 3-D physical model for the Oyster site) including
physical constraints on fluid flow and microbial properties, and correlation
of fluid flow predictions and moisture content measurements with bacterial
heterogeneity and transport.
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