2004 RESEARCH PROJECTS
Community Dynamics and Microbial Ecology


PROJECT: Microbial pathways for the reduction of mercury in saturated subsurface sediments
PRINCIPAL INVESTIGATOR: Tamar Barkay
Community Dynamics and Microbial Ecology

Mercury in contaminated subsurface soils may be leached to the saturated zone where its reduction to the elemental form, Hg(0), may enhance its mobilization.  Therefore, microbial transformations that reduce the mercuric ion, Hg(II), to Hg(0) are of key importance to the remediation of mercury in contaminated subsurface sediments.  Microbes may reduce Hg(II) by the activity of the inducible mercuric reductase (MR), the gene product of merA, and this process is well understood in a broad range of aerobic bacteria.  Recently described processes suggest that Hg(II) may be reduced by electrons that are produced during respiratory activities of sensitive microbes and that these activities may be of significant in environments with low levels of mercury contamination.  To date little is known about the reduction of Hg(II) by any mechanism under anoxic conditions.  Thus, we propose that:

In saturated sediments with high levels of mercury contamination Hg(II) resistant bacteria can potentially mobilize mercury by the activity of MR, whereas in less contaminated aquifers, sensitive microbes with the potential to reduce Hg(II) co-metablically dominates.  To test this hypothesis we will compare mer operon abundance and diversity in contaminated and clean subsurface sediments and in anaerobic enrichments with various electron donors and acceptors.

Novel mer genes and operons are found among anaerobic microbes.  To test this hypothesis we will examine the molecular characteristics of merA genes in environmental DNA extracts, of mer operons and their genomic location in cosmid libraries obtained from sediments and enrichment culture DNA, and of mer operons and their activities in Hg(II) resistant anaerobic isolates.

Metal and Hg(II) reducing Hg(II) sensitive anaerobes are more abundant in background as compared to contaminated sediments, and more significantly contribute to Hg(II) reduction in enrichments at low as compared to high Hg(II) concentrations.  To test this hypothesis we will enumerate Hg(II) sensitive/reducing anaerobes in sediments and enrichment cultures and follow production of Hg(0) in enrichments with varied Hg(II) levels.

The results of these studies will be the first comprehensive evaluation of microbial Hg(II) reduction in anaerobic environments, and of the presence, molecular organization, and activities specified by the mer operon among anaerobic bacteria.  In addition, a study on the ecology of microbes that reduce Hg(II) by an alternative mechanism will be initiated.  The results will contribute to the body of knowledge that support remedial action aimed at the immobilization of mercury in subsurface sediments.


PROJECT: Composition Of Microbial Communities Used For In Situ Radionuclide Immobilization: Natural Gene Transfer To Develop Resistance To Metal Toxicity
PRINCIPAL INVESTIGATOR: Jeffrey Fitts
Community Dynamics and Microbial Ecology

The proposed research addresses the need to understand how natural gene transfer could be used to help naturally-occurring microbial communities adopt resistance to specific environmental stresses such as heavy metals that inhibit their ability to reduce and immobilize metals and radionuclides. Nickel will be used as a model system to demonstrate how a metal resistance marker can be introduced into both single species and naturally-occurring microbial communities in contaminated sediments collected from the Oak Ridge Reservation Field Research Center (ORR FRC). The overall objective of this work is to demonstrate the feasibility of applying natural gene transfer to improve the performance of natural microbial communities under conditions imposed by metal stress, using Ni toxicity and resistance as a model system. We will determine if natural gene transfer of a broad host nickel resistance marker will help naturally-occurring microbial communities adapt to nickel toxicity imposed stress. The specific objectives of this work are to (1) identify individual species that accept the nickel resistance operon (nre), (2) evaluate how the introduced nickel resistance marker affects community composition and structure, (3) demonstrate applicability of natural gene transfer to improve community function under increased levels of toxic metal stress, and (4) demonstrate ability to enhance uranium immobilization in ORR FRC sediments by indigenous microorganisms that have adopted the nickel resistance marker through natural gene transfer. We anticipate that this work will lead to improved microbial community performance in the presence of nickel as measured by the ability of the community to reduce and immobilize uranium, and in general, this research will improve our understanding of how natural gene transfer can be incorporated into bioaugmentation strategies to immobilize metals and radionuclides.

 


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